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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
ChIP-seq
Assay category
3
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
3
February, 2023
1
October, 2019
Available data
2763
bam
2570
bigWig
1728
bed narrowPeak
1230
fastq
1108
tsv
1014
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
243
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
tissue
Organ
connective tissue
1
brain
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
embryo
connective tissue
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
medial globus pallidus
1
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