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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
624
ChIP-seq
Assay category
624
DNA binding
Target of assay
624
histone modification
623
histone
456
transcription factor
318
narrow histone mark
304
broad histone mark
95
RNA binding protein
88
recombinant protein
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
151
October, 2019
89
May, 2019
82
August, 2017
71
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
25
December, 2017
16
August, 2021
10
February, 2018
10
November, 2019
7
January, 2019
6
October, 2017
3
March, 2020
2
May, 2021
Available data
628
bigWig
624
bed narrowPeak
570
bam
344
bigBed narrowPeak
223
tagAlign
145
fastq
49
bed broadPeak
20
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
618
Homo sapiens
Biosample type
520
tissue
primary cell
67
in vitro differentiated cells
35
cell line
2
stem cell
Organ
164
brain
95
heart
81
pancreas
78
liver
54
blood vessel
54
vasculature
48
limb
27
connective tissue
27
epithelium
24
nerve
20
artery
20
kidney
19
musculature of body
embryo
6
spleen
2
adipose tissue
1
blood
1
bodily fluid
1
pituitary gland
Project
620
AMP
4
T1D
Genome assembly (visualization)
590
GRCh38
536
hg19
Lab
586
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
3
Bing Ren, UCSD
Audit category:
14
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
22
inconsistent control read length
1
inconsistent assembly
organ_slims!
embryo
biosample_type!
primary cell
BIOSAMPLE
ASSAY
624 results
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Clear Filters
ChIP-seq
tissue
liver
45
left cardiac atrium
35
heart left ventricle
24
tibial nerve
24
kidney
20
+ See 98 more…
in vitro differentiated cells
adipocyte
25
neural progenitor cell
13
hepatocyte
12
definitive endodermal cell
4
primitive gut cell
4
+ See 5 more…
cell line
HepG2
16
EndoC_BH1
12
Panc1
6
GM12878
1
stem cell
hESC
2
See all biosamples
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