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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
382
ChIP-seq
Assay category
382
DNA binding
Target of assay
244
transcription factor
76
histone
76
histone modification
66
recombinant protein
59
control
46
broad histone mark
37
RNA binding protein
30
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
382
November, 2017
308
August, 2017
210
June, 2019
189
October, 2019
141
February, 2023
133
May, 2021
106
August, 2021
97
May, 2019
88
November, 2018
81
December, 2017
74
October, 2018
73
September, 2018
68
February, 2021
65
April, 2019
50
July, 2018
44
April, 2018
44
May, 2022
41
September, 2020
40
May, 2024
37
November, 2019
35
December, 2018
30
January, 2019
27
May, 2020
26
February, 2018
17
October, 2017
11
September, 2017
7
August, 2020
7
July, 2019
4
August, 2018
4
January, 2018
3
June, 2018
3
March, 2020
2
November, 2020
1
March, 2019
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
382
Homo sapiens
Biosample type
315
cell line
58
tissue
9
primary cell
Organ
315
liver
67
brain
6
epithelium
6
vasculature
3
blood vessel
Project
382
AMP
Genome assembly (visualization)
281
hg19
280
GRCh38
Lab
382
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
embryo
BIOSAMPLE
ASSAY
382 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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