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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
7
total RNA-seq
2
ATAC-seq
Assay category
30
DNA binding
7
Transcription
2
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
551
February, 2021
334
November, 2017
301
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
September, 2018
65
April, 2019
64
December, 2017
49
April, 2018
47
October, 2018
39
August, 2021
31
November, 2019
30
December, 2018
26
January, 2019
21
February, 2018
20
March, 2020
20
May, 2022
14
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
115
tsv
106
bed narrowPeak
64
xls
57
txt
41
bam
39
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
39
Homo sapiens
Biosample type
22
in vitro differentiated cells
14
cell line
3
primary cell
Organ
17
liver
embryo
3
epithelium
2
connective tissue
Project
39
AMP
Genome assembly (visualization)
38
hg19
23
GRCh38
Lab
23
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
organ_slims!
embryo
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
cell line
HepG2
14
primary cell
hepatocyte
3
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