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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
89
total RNA-seq
6
RRBS
3
WGBS
1
DNase-seq
Assay category
91
DNA binding
89
Transcription
9
DNA methylation
1
DNA accessibility
Target of assay
49
histone
49
histone modification
36
control
25
broad histone mark
24
narrow histone mark
6
transcription factor
1
RNA binding protein
Date released
314
May, 2020
262
May, 2021
238
February, 2021
202
August, 2021
190
August, 2017
166
July, 2018
162
May, 2022
127
February, 2023
121
October, 2019
93
November, 2017
83
July, 2019
59
March, 2020
59
September, 2020
47
April, 2018
47
September, 2023
27
September, 2018
24
November, 2019
23
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
16
February, 2018
16
January, 2021
15
April, 2019
15
November, 2018
14
May, 2023
13
October, 2018
11
October, 2017
10
December, 2019
10
November, 2020
9
January, 2019
7
August, 2020
6
January, 2018
6
September, 2017
5
December, 2018
5
June, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
215
fastq
211
bam
207
bigWig
bed narrowPeak
89
tsv
63
tagAlign
39
bed broadPeak
39
bigBed narrowPeak
22
bed bed3+
14
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
Organism
189
Homo sapiens
Biosample type
164
tissue
26
primary cell
Organ
139
pancreas
connective tissue
54
adipose tissue
36
liver
13
musculature of body
12
epithelium
Project
190
AMP
Genome assembly (visualization)
116
hg19
111
GRCh38
Lab
190
AMP-T2D consortium
Audit category:
21
missing controlled_by
organ_slims!
embryo
connective tissue
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
190 results
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Clear Filters
ChIP-seq
total RNA-seq
RRBS
WGBS
DNase-seq
tissue
islet of Langerhans
24
89
liver
31
1
3
skeletal muscle tissue
9
4
pancreas
2
right lobe of liver
1
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
1
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