Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
44
ChIP-seq
21
ATAC-seq
1
pCHi-C
Assay category
125
Transcription
44
DNA binding
21
DNA accessibility
Target of assay
22
histone
22
histone modification
16
transcription factor
12
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
667
February, 2021
397
November, 2017
352
August, 2017
307
August, 2021
280
October, 2019
194
May, 2020
191
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
87
November, 2018
81
December, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
130
bigWig
126
bam
119
tsv
6
bed narrowPeak
6
tagAlign
Organism
191
Homo sapiens
Biosample type
primary cell
130
in vitro differentiated cells
40
tissue
21
cell line
Organ
61
pancreas
26
epithelium
3
heart
embryo
1
connective tissue
1
thymus
Project
189
AMP
2
T1D
Genome assembly (visualization)
130
hg19
125
GRCh38
Lab
142
AMP-T2D consortium
49
Kyle Gaulton, UCSD
Audit category:
87
inconsistent ontology term
organ_slims!
embryo
biosample_type!
primary cell
BIOSAMPLE
ASSAY
191 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
+ See 8 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
cell line
EndoC_BH1
4
1
16
See all biosamples
Download