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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
7
ChIP-seq
3
single cell RNA-seq
1
total RNA-seq
Assay category
12
DNA accessibility
7
DNA binding
4
Transcription
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
control
1
narrow histone mark
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
17
fastq
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
14
kidney
7
brain
1
adipose tissue
1
connective tissue
1
pancreas
Project
23
AMP
Genome assembly (visualization)
13
GRCh38
2
hg19
Lab
14
Katalin Susztak, Upenn
8
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
missing controlled_by
organ_slims!
embryo
files.file_type!
bam
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
kidney
11
3
brain
7
adipose tissue
1
islet of Langerhans
1
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