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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
8
ATAC-seq
Assay category
72
DNA binding
8
DNA accessibility
Target of assay
39
transcription factor
37
histone
37
histone modification
broad histone mark
20
control
13
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
356
November, 2017
341
May, 2020
321
May, 2021
302
August, 2017
302
August, 2021
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
67
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
26
January, 2019
25
February, 2020
21
February, 2018
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
78
fastq
77
bam
59
bigWig
57
bed narrowPeak
41
bigBed narrowPeak
8
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
80
Homo sapiens
Biosample type
58
tissue
20
in vitro differentiated cells
2
stem cell
Organ
53
liver
embryo
12
epithelium
6
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
80
AMP
Genome assembly (visualization)
63
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
27
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
embryo
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
38
right lobe of liver
7
brain
5
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
8
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
stem cell
hESC
2
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