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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
Assay category
84
DNA binding
Target of assay
49
histone
49
histone modification
35
transcription factor
27
narrow histone mark
22
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
32
September, 2018
10
November, 2017
3
November, 2018
Available data
84
bam
84
fastq
83
bigWig
45
bed narrowPeak
14
bed bed3+
12
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
44
primary cell
22
tissue
13
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
13
liver
12
adipose tissue
brain
embryo
Project
84
AMP
Genome assembly (visualization)
83
hg19
76
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
84
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
organ_slims!
embryo
brain
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
cell line
HepG2
13
in vitro differentiated cells
adipocyte
5
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