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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
27
February, 2023
7
October, 2019
1
July, 2019
Available data
33
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
35
Homo sapiens
Biosample type
34
tissue
1
primary cell
Organ
190
pancreas
152
epithelium
97
kidney
89
bone element
86
heart
84
connective tissue
79
liver
46
adipose tissue
42
vasculature
41
blood vessel
36
musculature of body
35
artery
35
eye
31
brain
11
lung
9
blood
9
bodily fluid
5
gonad
5
limb
5
ovary
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
28
hg19
Lab
35
AMP-T2D consortium
organ_slims!
embryo
assay_slims!
Transcription
files.file_type!
bam
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
pCHi-C
ChIP-seq
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
1
4
2
primary cell
retinal pigment epithelial cell
1
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