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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
91
histone
91
histone modification
47
narrow histone mark
44
broad histone mark
28
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
9
October, 2019
8
August, 2017
5
December, 2017
4
November, 2019
2
August, 2021
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
1
May, 2019
Available data
47
bam
46
bed narrowPeak
46
bigWig
26
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
35
primary cell
6
cell line
6
in vitro differentiated cells
Organ
117
brain
73
pancreas
60
liver
49
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
45
AMP
2
T1D
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
47
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
embryo
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
cell line
EndoC_BH1
6
in vitro differentiated cells
hepatocyte
5
pancreatic PP cell
1
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