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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1035
total RNA-seq
single cell RNA-seq
16
small RNA-seq
Assay category
1051
Transcription
907
DNA binding
458
DNA accessibility
38
DNA methylation
16
3D chromatin structure
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
50
August, 2021
47
July, 2019
39
May, 2021
26
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
11
February, 2023
9
March, 2020
6
April, 2018
1
May, 2023
Available data
945
tsv
923
bam
917
bigWig
103
fastq
59
txt
Organism
1051
Homo sapiens
Biosample type
1051
tissue
156
primary cell
134
in vitro differentiated cells
81
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
291
pancreas
173
liver
62
bone element
51
kidney
21
brain
19
eye
16
heart
7
blood vessel
7
limb
7
vasculature
6
musculature of body
5
nerve
4
skeleton
2
artery
epithelium
1
spinal cord
Project
1044
AMP
7
T1D
Genome assembly (visualization)
918
GRCh38
918
hg19
Lab
969
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
1051 results
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Clear Filters
total RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
1
bone tissue
58
kidney
49
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