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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
746
total RNA-seq
174
single cell RNA-seq
14
small RNA-seq
Assay category
934
Transcription
790
DNA binding
376
DNA accessibility
32
DNA methylation
12
3D chromatin structure
Date released
450
February, 2021
155
August, 2021
143
May, 2020
47
September, 2023
43
July, 2019
24
February, 2020
22
October, 2019
21
May, 2022
9
April, 2020
7
February, 2023
6
March, 2020
4
May, 2023
2
May, 2021
1
December, 2019
Available data
775
tsv
646
bam
646
bigWig
66
txt
6
csv
Organism
934
Homo sapiens
Biosample type
934
tissue
265
primary cell
136
in vitro differentiated cells
81
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
pancreas
174
liver
115
kidney
109
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
4
skeleton
epithelium
1
spinal cord
Project
878
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
647
GRCh38
647
hg19
Lab
798
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
9
Xin Sun, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
organ_slims!
epithelium
pancreas
BIOSAMPLE
ASSAY
934 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
liver
167
1
1
kidney
49
64
bone tissue
58
heart left ventricle
3
18
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