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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
Date released
675
February, 2021
291
May, 2020
274
August, 2021
212
May, 2021
173
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
112
August, 2017
95
July, 2019
61
October, 2019
56
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
25
February, 2020
19
April, 2020
18
November, 2018
16
April, 2018
16
January, 2021
15
February, 2018
15
May, 2023
10
November, 2020
8
January, 2018
8
October, 2017
5
January, 2019
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
December, 2018
1
October, 2022
1
September, 2018
Available data
233
bam
233
bigWig
189
tsv
Organism
291
Homo sapiens
Biosample type
147
primary cell
143
tissue
1
cell line
Organ
144
liver
Project
246
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
246
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
organ_slims!
epithelium
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
291 results
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total RNA-seq
ATAC-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
tissue
liver
143
cell line
HepG2
1
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