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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
898
histone modification
897
histone
452
narrow histone mark
444
broad histone mark
235
control
145
transcription factor
42
RNA binding protein
5
chromatin remodeller
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
11
October, 2018
8
August, 2017
5
May, 2021
5
May, 2024
4
April, 2019
4
May, 2019
2
December, 2017
2
June, 2019
1
November, 2017
Available data
36
bigWig
35
bed narrowPeak
32
bam
25
bigBed narrowPeak
22
fastq
3
bed broadPeak
3
bigBed broadPeak
2
bed bed3+
Organism
42
Homo sapiens
Biosample type
cell line
28
tissue
9
in vitro differentiated cells
5
primary cell
Organ
11
heart
10
connective tissue
8
pancreas
epithelium
5
adipose tissue
5
vasculature
4
blood vessel
4
liver
3
brain
3
kidney
1
artery
1
eye
Project
42
AMP
Genome assembly (visualization)
35
GRCh38
31
hg19
Lab
32
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
organ_slims!
epithelium
assay_title!
FAIRE-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
+ See 9 more…
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
cardiac fibroblast
1
cardiac muscle cell
1
See all biosamples
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