Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1742
ChIP-seq
1402
total RNA-seq
428
ATAC-seq
293
single cell RNA-seq
193
DNase-seq
86
RNA microarray
84
snATAC-seq
57
pCHi-C
26
Hi-C
18
small RNA-seq
11
WGBS
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
11
DNA methylation
Date released
7
August, 2017
4
July, 2019
Available data
18
bam
17
bed bedMethyl
bigBed bedMethyl
17
bigWig
11
fastq
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
epithelium
47
pancreas
4
adipose tissue
4
connective tissue
4
liver
2
heart
1
blood vessel
1
vasculature
Project
11
AMP
Lab
11
AMP-T2D consortium
organ_slims!
epithelium
assay_title!
MeRIP-seq
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
aorta
1
+ See 1 more…
See all biosamples
Download