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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
498
ChIP-seq
263
single cell RNA-seq
205
ATAC-seq
193
total RNA-seq
86
RNA microarray
83
snATAC-seq
53
pCHi-C
28
WGBS
18
DNase-seq
7
Hi-C
5
GRO-seq
5
STARR-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
18
DNA accessibility
Date released
17
June, 2019
1
August, 2017
Available data
17
bam
17
bed bed3+
17
bed broadPeak
17
bed narrowPeak
17
bigBed broadPeak
17
bigBed narrowPeak
17
bigWig
Organism
18
Homo sapiens
Biosample type
17
tissue
1
primary cell
Organ
10
brain
9
kidney
epithelium
3
heart
2
pancreas
1
blood vessel
1
connective tissue
1
liver
1
vasculature
Project
18
AMP
Genome assembly (visualization)
190
GRCh38
hg19
Lab
18
AMP-T2D consortium
organ_slims!
epithelium
assembly!
hg19
BIOSAMPLE
ASSAY
18 results
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DNase-seq
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 10 more…
primary cell
cardiac fibroblast
1
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