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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
28
DNA accessibility
13
Transcription
Date released
206
May, 2021
147
May, 2020
54
May, 2022
51
February, 2023
42
February, 2021
40
September, 2020
35
June, 2019
30
August, 2017
18
July, 2019
15
July, 2018
12
September, 2018
10
April, 2018
8
January, 2021
6
November, 2020
3
November, 2017
2
June, 2018
1
March, 2023
1
November, 2018
1
October, 2019
Available data
39
fastq
3
bam
2
bigWig
1
bed bed3
1
bed bed3+
1
bed narrowPeak
1
tsv
Organism
42
Homo sapiens
Biosample type
545
tissue
70
cell line
42
primary cell
26
in vitro differentiated cells
Organ
epithelium
6
pancreas
3
connective tissue
Project
39
HPAP
3
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
39
Klaus Kaestner, Upenn
3
AMP-T2D consortium
Audit category:
27
audit script error
organ_slims!
epithelium
BIOSAMPLE
ASSAY
42 results
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snATAC-seq
single cell RNA-seq
ATAC-seq
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
12
osteoblast
1
1
1
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