Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
ChIP-seq
154
total RNA-seq
128
ATAC-seq
117
single cell RNA-seq
56
snATAC-seq
17
pCHi-C
13
DNase-seq
4
RRBS
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
13
DNA accessibility
Date released
10
June, 2019
2
August, 2017
1
November, 2020
Available data
13
bam
13
bed narrowPeak
13
bigBed narrowPeak
13
bigWig
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
1
fastq
Organism
13
Homo sapiens
Biosample type
178
tissue
13
primary cell
1
cell line
1
in vitro differentiated cells
Organ
epithelium
12
kidney
6
connective tissue
6
vasculature
5
brain
4
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
13
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
epithelium
assay_title!
Hi-C
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
cardiac muscle cell
1
hepatic stellate cell
1
osteoblast
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
See all biosamples
Download