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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
16
ATAC-seq
14
total RNA-seq
4
Hi-C
4
pCHi-C
Assay category
23
DNA binding
16
DNA accessibility
14
Transcription
4
3D chromatin structure
Target of assay
23
histone
23
histone modification
23
narrow histone mark
Date released
268
August, 2021
153
February, 2023
137
February, 2021
129
August, 2017
106
May, 2021
96
May, 2022
61
October, 2019
58
May, 2020
47
September, 2023
45
March, 2020
40
May, 2024
40
September, 2020
25
February, 2020
19
April, 2020
18
July, 2019
16
January, 2021
15
May, 2023
14
November, 2017
8
January, 2018
8
October, 2017
5
March, 2023
4
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
November, 2019
1
October, 2022
1
September, 2018
Available data
bam
182
bigWig
168
bed narrowPeak
56
bigBed narrowPeak
49
tagAlign
13
tsv
6
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
3
bedpe bed3+
3
hic
1
hdf5
1
tagAlign bed3+
Organism
61
Homo sapiens
Biosample type
56
tissue
4
in vitro differentiated cells
1
cell line
Organ
21
eye
4
connective tissue
4
gonad
4
ovary
4
pancreas
3
brain
epithelium
2
kidney
1
adipose tissue
1
blood vessel
1
heart
1
limb
1
lymph node
1
pituitary gland
1
skin of body
1
vasculature
1
vein
Project
61
AMP
Genome assembly (visualization)
9
hg19
3
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
epithelium
files.file_type!
bam
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
21
13
14
4
adipose tissue
1
dorsal plus ventral thalamus
1
heart
1
planum polare
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
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