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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
snATAC-seq
Assay category
72
Transcription
4
DNA accessibility
Date released
3
February, 2023
1
May, 2022
Available data
438
bed narrowPeak
347
bam
298
bigWig
201
bigBed narrowPeak
193
bed bed3+
192
bed broadPeak
bigBed broadPeak
70
fastq
64
xls
21
zippedFastqFolder
13
tsv
12
bed bed3
7
bed bedgraph
4
txt
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
tissue
Organ
1
musculature of body
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
organ_slims!
epithelium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
snATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
skeletal muscle tissue
1
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