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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
16
total RNA-seq
4
pCHi-C
2
ChIP-seq
Assay category
16
DNA accessibility
16
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
February, 2020
Available data
18
bed narrowPeak
3
bam
3
bed bed3+
3
bed broadPeak
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
2
tsv
Organism
38
Homo sapiens
Biosample type
38
tissue
Organ
938
pancreas
727
liver
673
connective tissue
epithelium
487
adipose tissue
360
heart
276
kidney
236
brain
216
vasculature
214
blood vessel
159
bone element
135
artery
83
limb
69
blood
69
bodily fluid
61
musculature of body
56
eye
40
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
38
AMP
Genome assembly (visualization)
15
hg19
Lab
38
AMP-T2D consortium
organ_slims!
epithelium
files.file_type!
bigBed broadPeak
month_released!
February, 2020
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
2
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