Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
14
total RNA-seq
1
GRO-seq
Assay category
18
DNA binding
14
Transcription
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Date released
13
February, 2018
9
December, 2017
8
August, 2021
2
May, 2021
1
January, 2018
Available data
32
bam
27
bigWig
23
fastq
14
tsv
12
bed narrowPeak
3
bed bed3+
Organism
33
Homo sapiens
Biosample type
25
in vitro differentiated cells
8
cell line
Organ
946
pancreas
791
liver
684
connective tissue
epithelium
491
adipose tissue
393
heart
354
kidney
285
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
33
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
1
hg18
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
epithelium
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
33 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
Download