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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
Assay category
3
DNA accessibility
Date released
February, 2021
3
February, 2023
Available data
2529
bam
2343
bigWig
1643
bed narrowPeak
1062
fastq
966
bigBed narrowPeak
917
tsv
383
tagAlign
300
bed broadPeak
263
bigBed broadPeak
250
bed bed3+
73
zippedFastqFolder
72
txt
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
10
bed bed3
3
bed bedgraph
3
hdf5
3
tar
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
files.file_type!
xls
month_released!
February, 2021
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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