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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
515
ChIP-seq
Assay category
515
DNA binding
Target of assay
246
transcription factor
175
histone
175
histone modification
106
broad histone mark
91
control
69
narrow histone mark
66
recombinant protein
39
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
279
October, 2019
249
August, 2021
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
501
bam
421
bigWig
402
bed narrowPeak
401
bigBed narrowPeak
318
fastq
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
3
tar
Organism
515
Homo sapiens
Biosample type
315
cell line
197
tissue
3
primary cell
Organ
315
liver
119
brain
56
vasculature
53
blood vessel
21
heart
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
515
AMP
Genome assembly (visualization)
368
GRCh38
368
hg19
Lab
515
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
files.file_type!
xls
BIOSAMPLE
ASSAY
515 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
ascending aorta
16
thoracic aorta
16
caudate nucleus
15
substantia nigra
15
+ See 12 more…
primary cell
astrocyte of the cerebellum
3
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