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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
ChIP-seq
Assay category
3
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
2
July, 2019
2
October, 2019
Available data
3075
bam
2828
bigWig
1626
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
2
primary cell
1
cell line
1
tissue
Organ
4
brain
2
blood vessel
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
4 results
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Hi-C
ChIP-seq
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
cell line
Panc1
1
tissue
medial globus pallidus
1
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