Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
3
Hi-C
Assay category
64
DNA accessibility
3
3D chromatin structure
Date released
64
August, 2021
2
July, 2019
1
October, 2019
Available data
3075
bam
2828
bigWig
1626
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
67
Homo sapiens
Biosample type
64
tissue
2
primary cell
1
cell line
Organ
64
kidney
3
brain
2
blood vessel
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
67
AMP
Genome assembly (visualization)
65
GRCh38
3
hg19
Lab
64
Katalin Susztak, Upenn
3
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
tissue
kidney
64
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
cell line
Panc1
1
Download