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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1209
total RNA-seq
1204
ChIP-seq
223
ATAC-seq
175
DNase-seq
30
single cell RNA-seq
18
Hi-C
18
small RNA-seq
13
RRBS
4
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
30
Transcription
Target of assay
3
control
Date released
15
July, 2018
10
April, 2018
3
July, 2019
2
June, 2018
Available data
30
bam
30
bigWig
30
tsv
26
fastq
Organism
30
Homo sapiens
Biosample type
30
primary cell
Organ
74
pancreas
epithelium
4
connective tissue
3
brain
Project
30
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
30
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
30 results
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single cell RNA-seq
primary cell
pancreatic cell
7
mesenchymal cell
6
pancreatic stellate cell
4
cerebellar granule cell
2
co-expressing pancreatic endocrine cell
2
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