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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
704
histone
704
histone modification
453
transcription factor
370
narrow histone mark
334
broad histone mark
275
control
93
RNA binding protein
89
recombinant protein
32
chromatin remodeller
5
other context
5
other post-translational modification
2
nucleotide modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
August, 2017
2
December, 2017
2
December, 2018
Available data
32
bam
32
bed narrowPeak
32
bigBed narrowPeak
32
bigWig
32
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
30
cell line
2
tissue
Organ
23
liver
10
blood
10
bodily fluid
epithelium
Project
32
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
organ_slims!
epithelium
month_released!
August, 2017
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
cell line
HepG2
20
GM12878
10
tissue
liver
2
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