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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
14
total RNA-seq
Assay category
18
DNA binding
14
Transcription
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Date released
13
February, 2018
9
December, 2017
8
August, 2021
2
May, 2021
Available data
32
bam
27
bigWig
23
fastq
14
tsv
12
bed narrowPeak
3
bed bed3+
Organism
32
Homo sapiens
Biosample type
24
in vitro differentiated cells
8
cell line
Organ
682
pancreas
628
liver
592
connective tissue
441
adipose tissue
epithelium
241
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
57
musculature of body
45
blood
45
bodily fluid
42
nerve
36
embryo
20
vein
18
ureter
15
spleen
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
32
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
epithelium
month_released!
November, 2018
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
18
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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