Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
3
Hi-C
Assay category
12
DNA accessibility
3
3D chromatin structure
Date released
10
February, 2023
2
February, 2021
2
July, 2019
1
October, 2019
Available data
2988
bam
2788
bigWig
1593
bed narrowPeak
1444
tsv
1013
fastq
893
bigBed narrowPeak
391
tagAlign
291
bed broadPeak
254
bigBed broadPeak
243
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
23
bed bedMethyl
23
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
7
bed bedgraph
7
csv
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
3
primary cell
2
cell line
Organ
7
connective tissue
4
bone element
4
brain
4
skeleton
2
blood vessel
epithelium
2
liver
2
vasculature
1
pancreas
Project
15
AMP
Genome assembly (visualization)
15
hg19
3
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent replicate
Audit category:
1
inconsistent assembly
organ_slims!
epithelium
month_released!
November, 2018
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
osteoblast
1
cell line
HepG2
1
Panc1
1
Download