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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ChIP-seq
5
total RNA-seq
Assay category
100
DNA binding
5
Transcription
Target of assay
54
transcription factor
24
histone
24
histone modification
22
control
12
broad histone mark
12
narrow histone mark
8
RNA binding protein
8
chromatin remodeller
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
105
bam
105
fastq
82
bigWig
77
bed narrowPeak
57
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
105
Homo sapiens
Biosample type
55
tissue
24
in vitro differentiated cells
23
cell line
3
stem cell
Organ
68
liver
epithelium
18
blood
18
bodily fluid
13
embryo
7
spleen
Project
105
AMP
Genome assembly (visualization)
87
GRCh38
87
hg19
Lab
105
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
organ_slims!
epithelium
month_released!
April, 2019
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
cell line
GM12878
18
HepG2
5
stem cell
hESC
3
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