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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
8
ATAC-seq
Assay category
90
DNA binding
8
DNA accessibility
Target of assay
40
transcription factor
29
histone
29
histone modification
21
control
18
broad histone mark
11
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
92
fastq
90
bam
70
bigWig
68
bed narrowPeak
42
bigBed narrowPeak
15
bed bed3+
14
tagAlign
4
bed broadPeak
Organism
98
Homo sapiens
Biosample type
71
tissue
24
in vitro differentiated cells
3
stem cell
Organ
63
liver
epithelium
16
brain
13
embryo
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
98
AMP
Genome assembly (visualization)
75
GRCh38
74
hg19
Lab
97
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
27
inconsistent control
Audit category:
5
missing controlled_by
Audit category:
10
inconsistent control read length
organ_slims!
epithelium
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
38
brain
15
right lobe of liver
10
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 3 more…
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
stem cell
hESC
3
See all biosamples
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