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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
386
ChIP-seq
Assay category
386
DNA binding
Target of assay
241
transcription factor
73
histone
73
histone modification
69
control
66
recombinant protein
46
broad histone mark
35
RNA binding protein
27
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
546
February, 2021
386
November, 2017
283
May, 2020
267
May, 2021
253
August, 2017
218
October, 2019
198
June, 2019
131
July, 2018
115
May, 2019
87
November, 2018
79
April, 2019
77
July, 2019
75
December, 2017
74
October, 2018
45
August, 2021
44
November, 2019
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
April, 2018
15
October, 2017
13
March, 2020
11
September, 2018
6
November, 2020
6
September, 2017
2
June, 2018
1
March, 2019
Available data
386
bam
328
bigWig
318
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
3
tar
Organism
386
Homo sapiens
Biosample type
314
cell line
69
tissue
3
primary cell
Organ
314
liver
78
brain
epithelium
6
vasculature
3
blood vessel
Project
386
AMP
Genome assembly (visualization)
276
GRCh38
274
hg19
Lab
386
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
BIOSAMPLE
ASSAY
386 results
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Clear Filters
ChIP-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
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primary cell
astrocyte of the cerebellum
3
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