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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
634
February, 2021
400
November, 2017
374
August, 2017
355
May, 2021
253
October, 2019
241
May, 2020
231
August, 2021
135
July, 2018
115
May, 2019
87
July, 2019
80
April, 2019
78
November, 2018
75
December, 2017
74
October, 2018
60
February, 2023
60
May, 2022
56
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
25
June, 2019
20
November, 2019
16
April, 2018
15
October, 2017
12
September, 2018
9
April, 2020
8
November, 2020
September, 2017
5
January, 2018
5
March, 2023
4
December, 2019
4
May, 2023
2
June, 2018
1
August, 2018
1
March, 2019
1
October, 2022
Available data
78
fastq
77
bam
70
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
78
Homo sapiens
Biosample type
61
cell line
16
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
4
pancreas
Project
78
AMP
Genome assembly (visualization)
70
GRCh38
61
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
month_released!
September, 2017
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
body of pancreas
2
pancreas
2
primary cell
pancreatic cell
1
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