Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
23
total RNA-seq
4
MeRIP-seq
1
DNase-seq
1
Hi-C
Assay category
27
DNA accessibility
23
Transcription
1
3D chromatin structure
Target of assay
2
control
2
nucleotide modification
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
50
bam
27
bed narrowPeak
24
bigWig
23
tsv
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
bigBed narrowPeak
1
hic
Organism
55
Homo sapiens
Biosample type
44
tissue
6
primary cell
5
in vitro differentiated cells
Organ
65
pancreas
epithelium
7
connective tissue
1
adipose tissue
Project
55
AMP
Genome assembly (visualization)
51
hg19
50
GRCh38
Lab
51
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
55 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
MeRIP-seq
DNase-seq
Hi-C
tissue
islet of Langerhans
19
19
4
1
adipose tissue(adipose white tissue)
1
primary cell
osteoblast
1
4
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
Download