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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
3
single cell RNA-seq
1
Hi-C
1
RNA microarray
Assay category
34
DNA binding
3
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
617
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
307
August, 2021
253
October, 2019
195
June, 2019
135
July, 2018
120
May, 2022
118
February, 2023
88
November, 2018
87
July, 2019
80
April, 2019
75
December, 2017
74
October, 2018
65
May, 2019
55
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
35
fastq
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
3
tsv
Organism
39
Homo sapiens
Biosample type
28
cell line
9
tissue
2
in vitro differentiated cells
Organ
27
blood
27
bodily fluid
7
spleen
epithelium
6
liver
3
kidney
Project
39
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
39
AMP-T2D consortium
Audit category:
3
audit script error
2
inconsistent ontology term
1
inconsistent control
organ_slims!
epithelium
blood vessel
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
single cell RNA-seq
Hi-C
RNA microarray
cell line
GM12878
27
HepG2
1
tissue
spleen
7
kidney
1
kidney interstitium
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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