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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
15
small RNA-seq
12
WGBS
8
RRBS
6
ATAC-seq
5
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
44
Transcription
20
DNA methylation
8
DNA accessibility
5
3D chromatin structure
Target of assay
3
control
Date released
400
November, 2017
371
May, 2021
341
May, 2020
308
August, 2021
275
October, 2019
257
August, 2017
228
February, 2021
180
June, 2019
139
February, 2023
133
July, 2018
120
May, 2022
115
May, 2019
87
November, 2018
80
April, 2019
77
July, 2019
75
December, 2017
56
March, 2020
51
October, 2018
47
September, 2023
44
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
April, 2018
14
May, 2023
12
September, 2018
7
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
4
November, 2020
2
June, 2018
1
August, 2022
1
October, 2022
Available data
61
bam
61
bigWig
44
tsv
16
bed bedMethyl
16
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
1
bed bed3+
1
hdf5
Organism
77
Homo sapiens
Biosample type
67
tissue
10
primary cell
Organ
25
heart
18
brain
connective tissue
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
77
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
77
AMP-T2D consortium
organ_slims!
epithelium
connective tissue
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
small RNA-seq
WGBS
RRBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 24 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
cardiac muscle cell
1
+ See 3 more…
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