Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
811
histone modification
810
histone
460
transcription factor
417
narrow histone mark
393
broad histone mark
278
control
91
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
2
nucleotide modification
Date released
35
November, 2017
21
November, 2018
6
January, 2019
6
October, 2018
5
May, 2021
4
April, 2019
4
August, 2017
4
May, 2019
2
December, 2017
2
December, 2018
1
August, 2021
1
June, 2019
Available data
85
bam
83
bigWig
82
bed narrowPeak
80
bigBed narrowPeak
76
fastq
7
bed broadPeak
7
bigBed broadPeak
2
bed bed3+
1
tar
Organism
91
Homo sapiens
Biosample type
64
cell line
18
tissue
5
in vitro differentiated cells
4
primary cell
Organ
58
liver
10
blood
10
bodily fluid
connective tissue
9
pancreas
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
91
AMP
Genome assembly (visualization)
82
hg19
77
GRCh38
Lab
85
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
organ_slims!
epithelium
connective tissue
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
tissue
body of pancreas
5
heart left ventricle
3
islet of Langerhans
2
ascending aorta
1
coronary artery
1
+ See 6 more…
in vitro differentiated cells
embryonic stem cell
5
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
cardiac muscle cell
1
See all biosamples
Download