Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
Hi-C
3
pCHi-C
Assay category
12
3D chromatin structure
Date released
10
March, 2020
3
October, 2019
1
August, 2018
1
August, 2021
Available data
2601
bam
2416
bigWig
1485
bed narrowPeak
1161
tsv
897
bigBed narrowPeak
858
fastq
375
tagAlign
279
bed broadPeak
256
bigBed broadPeak
223
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
15
bedpe bed3+
14
hic
12
bed bed3
8
csv
7
bed bedgraph
3
tar
2
hdf5
2
ibed
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
7
in vitro differentiated cells
7
tissue
1
cell line
Organ
pancreas
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
15
AMP
Genome assembly (visualization)
14
hg19
Lab
14
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
pancreas
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
white fat cell
1
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 1 more…
cell line
HepG2
1
See all biosamples
Download