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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
single cell RNA-seq
21
snATAC-seq
Assay category
60
Transcription
21
DNA accessibility
Date released
54
May, 2022
19
September, 2020
6
February, 2021
1
November, 2018
1
September, 2018
Available data
2601
bam
2456
bigWig
1525
bed narrowPeak
1161
tsv
897
bigBed narrowPeak
858
fastq
375
tagAlign
279
bed broadPeak
256
bigBed broadPeak
223
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
15
bedpe bed3+
14
hic
12
bed bed3
8
csv
7
bed bedgraph
3
tar
2
hdf5
2
ibed
1
tagAlign bed3+
1
vcf
Organism
81
Homo sapiens
Biosample type
75
primary cell
6
tissue
Organ
epithelium
pancreas
5
kidney
1
liver
Project
73
HPAP
8
AMP
Lab
73
Klaus Kaestner, Upenn
8
AMP-T2D consortium
Audit category:
5
audit script error
organ_slims!
epithelium
pancreas
BIOSAMPLE
ASSAY
81 results
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single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic cell
2
tissue
kidney
5
liver
1
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