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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
34
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
Assay category
60
DNA accessibility
60
Transcription
Date released
677
February, 2021
350
November, 2017
341
May, 2020
305
August, 2021
297
May, 2021
279
August, 2017
197
October, 2019
158
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
90
July, 2019
88
November, 2018
67
December, 2017
58
March, 2020
56
May, 2019
55
October, 2018
47
September, 2023
45
November, 2019
43
April, 2019
40
September, 2020
35
December, 2018
31
February, 2018
26
January, 2019
22
February, 2020
20
May, 2024
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
13
October, 2017
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
5
September, 2018
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
54
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
120
Homo sapiens
Biosample type
66
tissue
54
primary cell
Organ
104
pancreas
epithelium
40
liver
2
musculature of body
Project
66
AMP
54
HPAP
Genome assembly (visualization)
39
hg19
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
epithelium
limb
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
1
primary cell
Langerhans cell
33
21
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