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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
61
DNA binding
Target of assay
61
histone
61
histone modification
47
transcription factor
34
broad histone mark
27
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
37
August, 2017
21
November, 2017
3
October, 2017
Available data
744
bigWig
728
bed narrowPeak
692
bam
362
bigBed narrowPeak
317
tagAlign
179
fastq
61
bed broadPeak
26
bigBed broadPeak
22
bed bed3+
1
tagAlign bed3+
Organism
55
Homo sapiens
Biosample type
35
tissue
14
cell line
12
primary cell
Organ
14
liver
13
musculature of body
12
brain
12
pancreas
epithelium
4
vasculature
3
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
61
AMP
Genome assembly (visualization)
61
hg19
38
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
cingulate gyrus
2
+ See 4 more…
cell line
HepG2
14
primary cell
skeletal muscle myoblast
11
astrocyte of the cerebellum
1
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