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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
292
control
145
histone
145
histone modification
73
narrow histone mark
72
broad histone mark
18
transcription factor
8
RNA binding protein
2
nucleotide modification
1
recombinant protein
Date released
28
August, 2017
23
October, 2019
12
May, 2021
8
November, 2017
1
December, 2017
1
October, 2017
Available data
bigWig
366
bed narrowPeak
356
bam
171
tagAlign
134
bigBed narrowPeak
82
fastq
27
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
1
tagAlign bed3+
Organism
73
Homo sapiens
Biosample type
56
tissue
15
in vitro differentiated cells
2
primary cell
Organ
15
connective tissue
11
brain
10
adipose tissue
8
liver
4
gonad
4
ovary
4
pancreas
2
eye
2
musculature of body
1
blood vessel
1
embryo
epithelium
1
limb
1
lymph node
1
vasculature
1
vein
Project
73
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
63
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
organ_slims!
epithelium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
tissue
islet of Langerhans
25
subcutaneous abdominal adipose tissue
10
liver
8
cingulate gyrus
3
skeletal muscle tissue
2
+ See 7 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
4
pancreatic endoderm
1
primary cell
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
See all biosamples
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