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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
1
Hi-C
Assay category
108
DNA binding
Transcription
1
3D chromatin structure
Target of assay
43
transcription factor
33
control
30
histone
30
histone modification
19
broad histone mark
13
RNA binding protein
11
narrow histone mark
2
chromatin remodeller
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
48
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
108
bam
93
fastq
75
bed narrowPeak
75
bigBed narrowPeak
75
bigWig
Organism
109
Homo sapiens
Biosample type
81
tissue
28
cell line
Organ
51
pancreas
27
blood
27
bodily fluid
23
adipose tissue
23
connective tissue
7
spleen
1
liver
Project
109
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
109
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
1
inconsistent control read length
organ_slims!
esophagus
assay_slims!
Transcription
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
Hi-C
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
spleen
7
+ See 1 more…
cell line
GM12878
27
HepG2
1
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