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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
total RNA-seq
11
ATAC-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
60
Transcription
17
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
14
May, 2023
Available data
bed narrowPeak
64
xls
57
txt
1
hic
Organism
78
Homo sapiens
Biosample type
78
tissue
Organ
78
kidney
Project
78
AMP
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
2368
AMP-T2D consortium
324
Klaus Kaestner, Upenn
211
Kyle Gaulton, UCSD
78
Katalin Susztak, Upenn
47
KPMP
24
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
organ_slims!
esophagus
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
49
11
11
6
1
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