Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Hi-C
2
RRBS
1
WGBS
Assay category
3
DNA methylation
2
3D chromatin structure
Date released
1
August, 2017
1
August, 2021
1
July, 2019
1
March, 2020
1
November, 2018
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
5
Homo sapiens
Biosample type
2
cell line
2
tissue
1
primary cell
Organ
13
pancreas
12
epithelium
11
heart
6
musculature of body
5
kidney
5
liver
5
vasculature
4
blood vessel
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vein
1
eye
1
limb
1
pericardium
Project
5
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
esophagus
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
Hi-C
RRBS
WGBS
cell line
HepG2
1
1
tissue
liver
1
1
primary cell
hepatocyte
1
Download