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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
8
November, 2017
6
August, 2017
2
October, 2019
Available data
427
bigWig
420
bed narrowPeak
378
bam
242
bigBed narrowPeak
147
tagAlign
118
fastq
36
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
16
Homo sapiens
Biosample type
8
cell line
8
primary cell
Organ
8
liver
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
16
AMP
Genome assembly (visualization)
16
hg19
13
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
esophagus
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
cell line
HepG2
8
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
2
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