Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
276
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
30
DNase-seq
17
pCHi-C
10
Hi-C
9
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
30
DNA accessibility
Date released
23
June, 2019
4
October, 2019
2
August, 2017
1
November, 2020
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
27
bed broadPeak
27
bigBed broadPeak
26
bed bed3+
1
fastq
Organism
30
Homo sapiens
Biosample type
175
tissue
30
primary cell
2
cell line
1
in vitro differentiated cells
Organ
18
epithelium
12
kidney
6
connective tissue
6
vasculature
5
brain
4
blood vessel
3
heart
2
liver
2
vein
eye
1
musculature of body
Project
30
AMP
Genome assembly (visualization)
26
GRCh38
21
hg19
Lab
30
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
eye
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
cardiac fibroblast
3
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
+ See 17 more…
See all biosamples
Download