Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
949
histone modification
948
histone
482
narrow histone mark
465
broad histone mark
464
transcription factor
342
control
104
RNA binding protein
89
recombinant protein
31
chromatin remodeller
5
nucleotide modification
4
other context
4
other post-translational modification
Date released
67
November, 2017
19
November, 2018
7
October, 2019
Available data
94
bam
93
bed narrowPeak
93
bigWig
87
fastq
86
bigBed narrowPeak
bed broadPeak
1
bigBed broadPeak
Organism
93
Homo sapiens
Biosample type
90
cell line
3
tissue
Organ
83
liver
7
kidney
3
spleen
Project
93
AMP
Genome assembly (visualization)
92
GRCh38
89
hg19
Lab
93
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
organ_slims!
eye
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
93 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
83
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
spleen
3
Download